Religious groups and churches have always played, and continue to play, vital roles in the settlement and integration of newcomers to Canada. In the 1980s, several not-for-profit agencies emerged with Catholic and Mennonite roots to respond to the arrival of thousands of refugees to the province from Southeast Asia and Central America. Today, these agencies are particularly interesting as they both challenge prevailing views on secularization and the provision of public services and play an exceptionally active role in providing services to newcomers. This paper explores the interplay between the prevalence of a liberal secular ideology in Canada and the shifting identities of faith-based organizations in Alberta. Based on archival research and interviews, this paper demonstrates that it is the shifting and, often conflicting, views of staff and volunteers that have contributed to the secularization of identities in most of these agencies.